Title

IMPLEMENTATION OF CROSSBAR WEB SERVICE FOR INTERACTIVE VISUALIZATIONS OF BIOLOGICAL NETWORKS

Abstract

Abstract

Existing computational tools, resources, and services to assist experimental biomed-
ical research lack data diversity and data connectivity and therefore, they are limited

in helping to solve real world problems. Within the framework of CROssBAR project
aiming for drug discovery, CROssBAR database (CROssBAR-DB) integrated diverse

biomedical resources with the predictions of a comprehensive computing resource de-
veloped using machine learning and deep learning-based methods. It is crucial for the

users to perform easily search on CROssBAR-DB, and then to visualize the result of

the search. For this reason, CrossBAR web service (CROssBAR-WS) is designed, de-
veloped and implemented within the scope of this thesis. In CROssBAR-WS, knowl-
edge graphs can be generated by using the open-source graph library Cytoscape.js.

CROssBAR-WS is available at crossbar.kansil.org.

Biography:

Supervisor(s)

Supervisor(s)

AHMET ATAKAN

Date and Location

Date and Location

2020-09-24;16:00:00-Webinar

Category

Category

MSc_Thesis